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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844878.1_cds_XP_016509129.1_22085
CDS Infomation

[gene=LOC107826644] [db_xref=GeneID:107826644] [protein=alpha-amylase-like] [protein_id=XP_016509129.1] [location=complement(join(486..740,1033..1838,2706..2838,2967..3041))] [gbkey=CDS]
Sequence

ATGAATTCTCTTTTCCCTCTTTGTTTAATTCTCTCTCTTTTTCCTATATTTGCAACTCCA
ACTTTGTTGTTTCAGGGGTTCAATTGGGAATCAAGTAATCAGCAAGGTGGATGGTACAAC
TCTCTAATCAACTTAGTTCCAGATTTGGCAAAAGCCGGAATTACTCATGTTTGGTTACCA
CCATCATCTAACTCTGTTTCACCTCAAGGTTATATGCCAGGAAGATTGTATGACTTAGAT
ACATCCAAGTATGGGAATCAGCAACAACTGCAAGCTCTTATTAAGGCTTTACATGATCAG
GGAATAAAAGCTGTTGCTGATATAGTTATAAACCACAGATGCGCCGATAAGAAAGATAGC
AGGGGAATATACTGCATCTTTGAAGGCGGAACGTCTGATGATCGTCTTGATTGGGGTCCG
CATATGATTTGCAAAGGCGACTCGCAATATTCTGATGGCACGGGGAATGATGACACCGGT
TTAGACTTTGCAGCTGCACCTGATATCGATCATCTTAACCCCCAAGTCCAAAAAGAGTTG
TCTGATTGGATGAATTGGCTAAAAACTGAAATTGGATTTGATGGTTGGCGTTTCGATTTT
GTTAGAGGGTATGCTCCTAGTATCACCAAGATTTATATGGAAAACACGTCCCCGGATTTT
GCAGTTGGTGAGTTTTGGAACTCTATTGCCTATGGCGGAGATGGAAAACCGGACTATAAC
CAGGACAATCATAGGAATGAGCTAGCCGGGTGGGTTCAAAATGGCGGTGGAGCTGTAACA
GCTTTTGATTTCACAACTAAAGGAATTCTTCAAGCTGCTGTTGAAGGGGAGTTGTGGAGA
TTGAAGGATTCAAATGGTAAACCTCCTGGTTTGATAGGTATTTTGCCTCAAAATGCTGTG
ACTTTTATCGATAATCATGATACTGGATCGACACAAAAGCTTTGGCCTTTCCCTTCAGAC
AAAGTTATGCAAGGTTATGCATATATTCTCACACATCCTGGAATTCCCTCAGTGTTTTAT
GACCATTTCTTTGATTGGGGGCTGAAGGACGGAATTTCTACTTTGGTGTCAATAAGGAAT
AGGAATGGAATATCTGCAACAAGTAATGTGCAGATAATGGCTGCTGATGCTGATCTTTAT
GTAGCAATGGTTGATCAGAAGATTGTTGTGAAGATTGGTCCAAAAACTGATCTTGGAAGT
CTTATTCCACCTAATTATCAGGTGGCAACTTCTGGACAGGACTATGTTGTATGGGAGCAA
AAGTCATAA

Peptide Sequence

PEP ID

XP_016509129.1
PEP Infomation

PREDICTED: alpha-amylase-like [Nicotiana tabacum]
Sequence

MNSLFPLCLILSLFPIFATPTLLFQGFNWESSNQQGGWYNSLINLVPDLAKAGITHVWLP
PSSNSVSPQGYMPGRLYDLDTSKYGNQQQLQALIKALHDQGIKAVADIVINHRCADKKDS
RGIYCIFEGGTSDDRLDWGPHMICKGDSQYSDGTGNDDTGLDFAAAPDIDHLNPQVQKEL
SDWMNWLKTEIGFDGWRFDFVRGYAPSITKIYMENTSPDFAVGEFWNSIAYGGDGKPDYN
QDNHRNELAGWVQNGGGAVTAFDFTTKGILQAAVEGELWRLKDSNGKPPGLIGILPQNAV
TFIDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGIPSVFYDHFFDWGLKDGISTLVSIRN
RNGISATSNVQIMAADADLYVAMVDQKIVVKIGPKTDLGSLIPPNYQVATSGQDYVVWEQ
KS

Transcript Sequence

Gene sequence data has not been registered.